Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_21625 | Not Available | Positive | 4618171 - 4618632 | 16144.6 |
| hypothetical protein | APR48_21630 | Not Available | Positive | 4618724 - 4619806 | 37946.9 |
| hypothetical protein | APR48_21635 | Not Available | Positive | 4619809 - 4620474 | 23545.9 |
| hypothetical protein | APR48_21640 | Not Available | Positive | 4620548 - 4624423 | 137528.0 |
| hypothetical protein | APR48_21645 | Not Available | Negative | 4624856 - 4625050 | 7826.52 |
| 3',5'-cyclic-nucleotide phosphodiesterase | APR48_21650 | Not Available | Negative | 4627476 - 4628279 | 29206.2 |
| guanylate cyclase | APR48_21655 | Not Available | Negative | 4628306 - 4630567 | 81358.4 |
| hypothetical protein | APR48_21660 | Not Available | Negative | 4630625 - 4631275 | 22666.5 |
| protein phosphatase | APR48_21665 | Not Available | Negative | 4631351 - 4632154 | 28561.1 |
| hypothetical protein | APR48_21670 | Not Available | Negative | 4632201 - 4632890 | 24172.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
