Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | APR48_21520 | Not Available | Negative | 4594041 - 4596581 | 94529.5 |
| pyruvate dehydrogenase | APR48_21525 | Not Available | Positive | 4596797 - 4599523 | 101519.0 |
| dihydrolipoamide acetyltransferase | APR48_21530 | Not Available | Positive | 4599573 - 4601264 | 57276.8 |
| mfs transporter | APR48_21535 | Not Available | Positive | 4601320 - 4601913 | 21677.8 |
| cyclopropane-fatty-acyl-phospholipid synthase | APR48_21545 | Not Available | Positive | 4602259 - 4603503 | 46418.1 |
| glutathione s-transferase | APR48_21550 | Not Available | Negative | 4603569 - 4604180 | 22710.4 |
| adenylosuccinate lyase | APR48_21555 | Not Available | Positive | 4604297 - 4605676 | 50322.4 |
| hypothetical protein | APR48_21560 | Not Available | Positive | 4605882 - 4607009 | 40774.0 |
| amino acid abc transporter substrate-binding protein | APR48_21565 | Not Available | Positive | 4607142 - 4609277 | 77233.3 |
| hypothetical protein | APR48_21570 | Not Available | Positive | 4609342 - 4609902 | 20598.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
