Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stereocilin | APR48_21470 | Not Available | Positive | 4585386 - 4585514 | 4188.77 |
| fad-dependent oxidoreductase | APR48_21475 | Not Available | Positive | 4585549 - 4586655 | 38181.9 |
| hypothetical protein | APR48_21480 | Not Available | Positive | 4586804 - 4587100 | 10314.4 |
| hypothetical protein | APR48_21485 | Not Available | Positive | 4587128 - 4587841 | 26531.4 |
| dihydroorotate dehydrogenase (quinone) | APR48_21490 | Not Available | Negative | 4587887 - 4588975 | 38390.2 |
| ribose 5-phosphate isomerase | APR48_21495 | Not Available | Positive | 4589019 - 4589735 | 24964.1 |
| glutaredoxin | APR48_21500 | Not Available | Negative | 4589736 - 4590386 | 22835.1 |
| oligopeptidase a | APR48_21505 | Not Available | Negative | 4590417 - 4592474 | 76129.8 |
| bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase | APR48_21510 | Not Available | Negative | 4592480 - 4593331 | 29510.1 |
| luxr family transcriptional regulator | APR48_21515 | Not Available | Negative | 4593412 - 4594044 | 23241.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
