Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit b | APR48_21420 | Not Available | Positive | 4576527 - 4578647 | 79696.4 |
| dna-binding protein | APR48_21425 | Not Available | Positive | 4578887 - 4579423 | 19389.6 |
| cysteine desulfurase iscs | APR48_21430 | Not Available | Positive | 4579532 - 4580752 | 44941.0 |
| scaffolding protein | APR48_21435 | Not Available | Positive | 4580794 - 4581207 | 14306.0 |
| iron-sulfur cluster assembly protein | APR48_21440 | Not Available | Positive | 4581209 - 4581532 | 11810.1 |
| co-chaperone hscb | APR48_21445 | Not Available | Positive | 4581596 - 4582114 | 19502.8 |
| molecular chaperone hsca | APR48_21450 | Not Available | Positive | 4582121 - 4583980 | 65113.3 |
| 2fe-2s ferredoxin | APR48_21455 | Not Available | Positive | 4584019 - 4584357 | 12191.3 |
| dna polymerase iii subunit epsilon | APR48_21460 | Not Available | Positive | 4584357 - 4585064 | 26078.0 |
| Trna-val | Not Available | Not Available | Positive | 4585150 - 4585224 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
