Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa carboxyltransferase | APR48_21370 | Not Available | Positive | 4565530 - 4567074 | 56466.2 |
| acetyl/propionyl-coa carboxylase subuit alpha | APR48_21375 | Not Available | Positive | 4567210 - 4569258 | 74186.1 |
| biotin synthase | APR48_21380 | Not Available | Positive | 4569273 - 4570289 | 36462.9 |
| lactoylglutathione lyase | APR48_21385 | Not Available | Positive | 4570286 - 4570774 | 17626.4 |
| arsr family transcriptional regulator | APR48_21390 | Not Available | Negative | 4570786 - 4571283 | 18247.2 |
| permease | APR48_21395 | Not Available | Positive | 4571401 - 4572306 | 31541.7 |
| lysine transporter lyse | APR48_21400 | Not Available | Negative | 4572320 - 4572958 | 22265.9 |
| ferredoxin | APR48_21405 | Not Available | Negative | 4572955 - 4573587 | 22266.5 |
| esterase | APR48_21410 | Not Available | Negative | 4573607 - 4575058 | 54215.6 |
| aromatic amino acid aminotransferase | APR48_21415 | Not Available | Negative | 4575225 - 4576421 | 42586.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
