Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dehydratase | APR48_01325 | Not Available | Positive | 281801 - 282277 | 17315.8 |
| enoyl-coa hydratase | APR48_01330 | Not Available | Positive | 282274 - 283056 | 27208.9 |
| hypothetical protein | APR48_01335 | Not Available | Positive | 283066 - 283443 | 13378.0 |
| thiolase | APR48_01340 | Not Available | Positive | 283440 - 284597 | 39367.9 |
| hypothetical protein | APR48_01345 | Not Available | Positive | 284605 - 286257 | 58610.0 |
| acyl--coa ligase | APR48_01350 | Not Available | Positive | 286345 - 287655 | 48208.9 |
| hypothetical protein | APR48_01355 | Not Available | Positive | 287652 - 288872 | 42897.5 |
| hypothetical protein | APR48_01360 | Not Available | Positive | 289035 - 290054 | 38493.3 |
| hypothetical protein | APR48_01365 | Not Available | Positive | 290075 - 291088 | 35380.7 |
| branched-chain amino acid abc transporter substrate-binding protein | APR48_01370 | Not Available | Positive | 291139 - 292305 | 41508.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
