Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_21320 | Not Available | Negative | 4555915 - 4556379 | 17007.5 |
| doxx family protein | APR48_21325 | Not Available | Negative | 4556439 - 4556852 | 14561.2 |
| pp_04225 | APR48_21330 | Not Available | Positive | 4557149 - 4558114 | Not Available |
| 2,4-dichlorophenoxyacetate dioxygenase | APR48_21335 | Not Available | Negative | 4558138 - 4559016 | 33249.5 |
| mfs transporter | APR48_21340 | Not Available | Negative | 4559045 - 4559983 | 32829.1 |
| iclr family transcriptional regulator | APR48_21345 | Not Available | Positive | 4560173 - 4560958 | 27993.8 |
| gntr family transcriptional regulator | APR48_21350 | Not Available | Negative | 4560999 - 4561640 | 23900.7 |
| methylmalonyl-coa mutase | APR48_21355 | Not Available | Positive | 4561799 - 4563961 | 77846.8 |
| gnat family acetyltransferase | APR48_21360 | Not Available | Positive | 4563970 - 4564443 | 17854.6 |
| transporter | APR48_21365 | Not Available | Positive | 4564437 - 4565489 | 37201.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
