Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator | APR48_21270 | Not Available | Negative | 4532945 - 4533610 | 24655.8 |
| abc transporter substrate-binding protein | APR48_21275 | Not Available | Negative | 4533773 - 4534792 | 35923.5 |
| histidine kinase | APR48_21280 | Not Available | Positive | 4535085 - 4537205 | 78268.5 |
| two-component system response regulator | APR48_21285 | Not Available | Positive | 4537202 - 4537939 | 27227.7 |
| hypothetical protein | APR48_21290 | Not Available | Positive | 4538287 - 4550552 | 387898.0 |
| hypothetical protein | APR48_21295 | Not Available | Negative | 4550605 - 4551696 | 39389.9 |
| omega amino acid--pyruvate aminotransferase | APR48_21300 | Not Available | Negative | 4551717 - 4553018 | 45841.0 |
| hypothetical protein | APR48_21305 | Not Available | Positive | 4553269 - 4554210 | 35933.9 |
| 6-aminohexanoate hydrolase | APR48_21310 | Not Available | Positive | 4554250 - 4555485 | 43916.0 |
| hypothetical protein | APR48_21315 | Not Available | Negative | 4555486 - 4555866 | 14310.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
