Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-methylcitrate dehydratase | APR48_21220 | Not Available | Negative | 4525354 - 4526724 | 47702.8 |
| atp-binding protein | APR48_21225 | Not Available | Positive | 4526872 - 4527768 | 31988.5 |
| iclr family transcriptional regulator | APR48_21230 | Not Available | Negative | 4527778 - 4528515 | 27155.2 |
| thioesterase | APR48_21235 | Not Available | Negative | 4528524 - 4528985 | 16534.0 |
| hypothetical protein | APR48_21240 | Not Available | Negative | 4529018 - 4529224 | 7114.79 |
| hypothetical protein | APR48_21245 | Not Available | Negative | 4529221 - 4529469 | 9111.3 |
| hypothetical protein | APR48_21250 | Not Available | Negative | 4529488 - 4529865 | 14288.8 |
| hypothetical protein | APR48_21255 | Not Available | Negative | 4530220 - 4530405 | 6516.32 |
| tricarboxylic transporter | APR48_21260 | Not Available | Negative | 4530437 - 4531471 | 35970.4 |
| histidine kinase | APR48_21265 | Not Available | Negative | 4531510 - 4532919 | 50202.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
