Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR48_21170 | Not Available | Negative | 4515233 - 4516036 | 28397.3 |
| hypothetical protein | APR48_21175 | Not Available | Negative | 4516033 - 4517067 | 35593.6 |
| amidohydrolase | APR48_21180 | Not Available | Negative | 4517064 - 4518650 | 58608.3 |
| hypothetical protein | APR48_21185 | Not Available | Negative | 4518815 - 4519708 | 33351.9 |
| hypothetical protein | APR48_21190 | Not Available | Negative | 4519856 - 4520881 | 36087.9 |
| citryl-coa lyase | APR48_21195 | Not Available | Negative | 4520952 - 4521863 | 33739.9 |
| formyl-coa transferase | APR48_21200 | Not Available | Negative | 4521891 - 4523132 | 43682.5 |
| acyl dehydratase | APR48_21205 | Not Available | Negative | 4523129 - 4523620 | 18463.0 |
| acyl-coa dehydrogenase | APR48_21210 | Not Available | Negative | 4523617 - 4524852 | 45280.7 |
| dehydratase | APR48_21215 | Not Available | Negative | 4524857 - 4525357 | 18606.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
