Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate 4-decarboxylase | APR48_21115 | Not Available | Negative | 4502074 - 4503741 | 62056.7 |
| aspartate-alanine antiporter | APR48_21120 | Not Available | Negative | 4503797 - 4505485 | 58806.7 |
| aspartate-alanine antiporter | APR48_21125 | Not Available | Negative | 4505512 - 4507182 | 57412.1 |
| sugar abc transporter | APR48_21130 | Not Available | Positive | 4507481 - 4508482 | 34053.3 |
| abc transporter permease | APR48_21135 | Not Available | Positive | 4508509 - 4509468 | 32747.0 |
| sugar abc transporter atp-binding protein | APR48_21140 | Not Available | Positive | 4509468 - 4510265 | 28621.3 |
| serine/threonine protein kinase | APR48_21145 | Not Available | Positive | 4510258 - 4511493 | 43747.6 |
| hypothetical protein | APR48_21150 | Not Available | Positive | 4511532 - 4512275 | 27104.9 |
| abc transporter substrate-binding protein | APR48_21160 | Not Available | Negative | 4513096 - 4514130 | 36670.2 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | APR48_21165 | Not Available | Negative | 4514172 - 4515236 | 38366.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
