Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | APR48_21005 | Not Available | Negative | 4479941 - 4480981 | 36642.1 |
| transporter | APR48_21010 | Not Available | Negative | 4481064 - 4482173 | 37964.7 |
| thiosulfohydrolase soxb | APR48_21015 | Not Available | Negative | 4482224 - 4483951 | 62272.0 |
| sulfur oxidation c-type cytochrome soxx | APR48_21020 | Not Available | Negative | 4483974 - 4484639 | 23592.7 |
| sulfur oxidation c-type cytochrome soxa | APR48_21025 | Not Available | Negative | 4484651 - 4485454 | 28979.8 |
| thiosulfate oxidation carrier complex protein soxz | APR48_21030 | Not Available | Negative | 4485464 - 4485763 | 10794.9 |
| thiosulfate oxidation carrier protein soxy | APR48_21035 | Not Available | Negative | 4485824 - 4486279 | 15537.8 |
| cytochrome c | APR48_21040 | Not Available | Negative | 4486329 - 4487387 | 36970.2 |
| sulfite dehydrogenase | APR48_21045 | Not Available | Negative | 4487371 - 4488714 | 48764.2 |
| hypothetical protein | APR48_21050 | Not Available | Negative | 4488734 - 4489045 | 10439.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
