Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein | APR48_20905 | Not Available | Negative | 4455354 - 4456154 | 29841.4 |
| cytidyltransferase | APR48_20910 | Not Available | Positive | 4456361 - 4457434 | 40158.6 |
| nicotinate phosphoribosyltransferase | APR48_20915 | Not Available | Positive | 4457507 - 4458952 | 52692.7 |
| galactosyldiacylglycerol synthase | APR48_20920 | Not Available | Positive | 4459283 - 4460431 | 41316.5 |
| hypothetical protein | APR48_20925 | Not Available | Positive | 4460428 - 4460919 | 19150.2 |
| protein tyrosine phosphatase | APR48_20930 | Not Available | Positive | 4460943 - 4461518 | 21337.7 |
| nadh oxidase | APR48_20935 | Not Available | Positive | 4461631 - 4462761 | 39637.8 |
| elongation factor g | APR48_20940 | Not Available | Negative | 4462809 - 4464827 | 73189.1 |
| two-component system response regulator | APR48_20945 | Not Available | Negative | 4465488 - 4466180 | 25373.4 |
| sensor protein kdpd | APR48_20950 | Not Available | Negative | 4466186 - 4468924 | 96965.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
