Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-chlorobenzoate--coa ligase | APR48_01275 | Not Available | Negative | 269576 - 271162 | 57213.0 |
| (2fe-2s)-binding protein | APR48_01280 | Not Available | Negative | 271164 - 271682 | 18552.4 |
| carbon monoxide dehydrogenase | APR48_01285 | Not Available | Negative | 271679 - 272509 | 29953.9 |
| carbon monoxide dehydrogenase | APR48_01290 | Not Available | Negative | 272506 - 275565 | 108258.0 |
| aldehyde dehydrogenase | APR48_01295 | Not Available | Negative | 275576 - 277030 | 51417.5 |
| lysr family transcriptional regulator | APR48_01300 | Not Available | Positive | 277221 - 278138 | 33504.0 |
| hypothetical protein | APR48_01305 | Not Available | Positive | 278406 - 279392 | 36213.4 |
| epimerase | APR48_01310 | Not Available | Positive | 279412 - 280446 | 36690.4 |
| hypothetical protein | APR48_01315 | Not Available | Negative | 280460 - 280858 | 14476.9 |
| hypothetical protein | APR48_01320 | Not Available | Positive | 280943 - 281689 | 25973.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
