Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR48_20750 | Not Available | Positive | 4425898 - 4426791 | 30811.1 |
| abc transporter permease | APR48_20755 | Not Available | Positive | 4426812 - 4427831 | 36503.7 |
| abc transporter atp-binding protein | APR48_20760 | Not Available | Positive | 4427828 - 4428574 | 26542.5 |
| abc transporter atp-binding protein | APR48_20765 | Not Available | Positive | 4428555 - 4429271 | 25526.5 |
| transketolase | APR48_20770 | Not Available | Positive | 4429298 - 4430146 | 30488.1 |
| transketolase | APR48_20775 | Not Available | Positive | 4430139 - 4431128 | 35115.2 |
| hypothetical protein | APR48_20780 | Not Available | Positive | 4431146 - 4432252 | 39117.1 |
| short-chain dehydrogenase | APR48_20785 | Not Available | Positive | 4432249 - 4432962 | 24883.7 |
| hypothetical protein | APR48_20790 | Not Available | Positive | 4432964 - 4434571 | 57222.8 |
| hypothetical protein | APR48_20795 | Not Available | Positive | 4434555 - 4435544 | 34040.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
