Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter substrate-binding protein | APR48_20700 | Not Available | Positive | 4413695 - 4414903 | 43999.5 |
| hypothetical protein | APR48_20705 | Not Available | Positive | 4415023 - 4415661 | 22602.2 |
| hypothetical protein | APR48_20710 | Not Available | Positive | 4415665 - 4417503 | 65686.0 |
| hypothetical protein | APR48_20715 | Not Available | Positive | 4417618 - 4420845 | 111308.0 |
| hypothetical protein | APR48_20720 | Not Available | Negative | 4420866 - 4421168 | 11380.9 |
| marr family transcriptional regulator | APR48_20725 | Not Available | Negative | 4421263 - 4421679 | 15347.4 |
| hypothetical protein | APR48_20730 | Not Available | Positive | 4421918 - 4422406 | 16558.1 |
| hypothetical protein | APR48_20735 | Not Available | Positive | 4422418 - 4423932 | 52904.2 |
| hypothetical protein | APR48_20740 | Not Available | Negative | 4423952 - 4424323 | 13232.0 |
| abc transporter substrate-binding protein | APR48_20745 | Not Available | Positive | 4424531 - 4425805 | 45676.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
