Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_20650 | Not Available | Positive | 4399752 - 4401251 | 54011.4 |
| hypothetical protein | APR48_20655 | Not Available | Negative | 4401264 - 4401608 | 11320.6 |
| isocitrate dehydrogenase | APR48_20660 | Not Available | Negative | 4401635 - 4403872 | 82516.3 |
| luxr family transcriptional regulator | APR48_20665 | Not Available | Positive | 4404108 - 4404857 | 27071.7 |
| oxalate/formate mfs antiporter | APR48_20670 | Not Available | Negative | 4404916 - 4406247 | 47727.0 |
| histidine kinase | APR48_20675 | Not Available | Positive | 4406531 - 4408360 | 66301.8 |
| hypothetical protein | APR48_20680 | Not Available | Negative | 4408342 - 4410042 | 60965.4 |
| nadph:quinone oxidoreductase | APR48_20685 | Not Available | Negative | 4410078 - 4411061 | 34513.5 |
| coa-transferase | APR48_20690 | Not Available | Negative | 4411067 - 4412287 | 42592.4 |
| hypothetical protein | APR48_20695 | Not Available | Negative | 4412284 - 4413501 | 44726.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
