Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | APR48_20485 | Not Available | Positive | 4358744 - 4359085 | 12228.8 |
| integrase | APR48_20490 | Not Available | Positive | 4359082 - 4359957 | 33157.1 |
| cation transporter | APR48_20495 | Not Available | Negative | 4360361 - 4361203 | 30462.3 |
| metal transporter | APR48_20500 | Not Available | Negative | 4362105 - 4365230 | 112558.0 |
| secretion protein hlyd | APR48_20505 | Not Available | Negative | 4365248 - 4366468 | 42210.4 |
| transporter | APR48_20510 | Not Available | Negative | 4366465 - 4367784 | 47817.2 |
| hypothetical protein | APR48_20515 | Not Available | Negative | 4368713 - 4369000 | 10611.7 |
| magnesium transporter mgtc | APR48_20525 | Not Available | Negative | 4371227 - 4371715 | 16877.4 |
| dde endonuclease | APR48_20530 | Not Available | Positive | 4372301 - 4373386 | 40843.3 |
| hypothetical protein | APR48_20535 | Not Available | Negative | 4373583 - 4374464 | 32642.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
