Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylcrotonoyl-coa carboxylase | APR48_20425 | Not Available | Negative | 4348593 - 4350191 | 57505.9 |
| dna-binding protein | APR48_20430 | Not Available | Negative | 4350198 - 4350683 | 17480.7 |
| acetyl-coa acetyltransferase | APR48_20435 | Not Available | Negative | 4350724 - 4351950 | 43828.6 |
| acetyl-coa acetyltransferase | APR48_20440 | Not Available | Negative | 4351947 - 4353044 | 38423.5 |
| hypothetical protein | APR48_20445 | Not Available | Negative | 4353045 - 4353536 | 17507.0 |
| crotonase | APR48_20450 | Not Available | Positive | 4353687 - 4354532 | 30700.0 |
| transposase | APR48_20465 | Not Available | Positive | 4356057 - 4356413 | 12935.8 |
| transposase | APR48_20470 | Not Available | Positive | 4356410 - 4356745 | 12312.2 |
| transposase | APR48_20475 | Not Available | Positive | 4356823 - 4358403 | 58793.4 |
| hypothetical protein | APR48_20480 | Not Available | Positive | 4358400 - 4358621 | 7771.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
