Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter substrate-binding protein | APR48_20370 | Not Available | Positive | 4337163 - 4338326 | 41445.9 |
| ketoacid-coa transferase | APR48_20375 | Not Available | Positive | 4338328 - 4339167 | 29552.8 |
| branched-chain amino acid abc transporter permease | APR48_20385 | Not Available | Positive | 4340017 - 4340889 | 30139.8 |
| branched-chain amino acid abc transporter permease | APR48_20390 | Not Available | Positive | 4340900 - 4341931 | 35740.0 |
| abc transporter atp-binding protein | APR48_20395 | Not Available | Positive | 4341928 - 4342707 | 27606.9 |
| abc transporter atp-binding protein | APR48_20400 | Not Available | Positive | 4342724 - 4343428 | 24895.5 |
| atp-dependent acyl-coa ligase | APR48_20405 | Not Available | Positive | 4343488 - 4345113 | 60047.7 |
| hypothetical protein | APR48_20410 | Not Available | Negative | 4345148 - 4346035 | 31202.3 |
| dehydratase | APR48_20415 | Not Available | Negative | 4346032 - 4346505 | 17621.3 |
| hypothetical protein | APR48_20420 | Not Available | Negative | 4346542 - 4348563 | 72066.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
