Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urocanate hydratase | APR48_20305 | Not Available | Negative | 4322340 - 4324073 | 62915.9 |
| histidine ammonia-lyase | APR48_20310 | Not Available | Negative | 4324127 - 4325692 | 53649.9 |
| histidine utilization repressor | APR48_20315 | Not Available | Negative | 4325757 - 4326536 | 28809.3 |
| sulfonate abc transporter atp-binding protein | APR48_20320 | Not Available | Negative | 4326542 - 4327330 | 29267.3 |
| abc transporter permease | APR48_20325 | Not Available | Negative | 4327336 - 4328142 | 29095.4 |
| abc transporter permease | APR48_20330 | Not Available | Negative | 4328255 - 4329217 | 33700.6 |
| atp-dependent dna helicase recq | APR48_20335 | Not Available | Positive | 4329591 - 4331465 | 68152.3 |
| hypothetical protein | APR48_20345 | Not Available | Positive | 4332760 - 4333008 | 8438.17 |
| transposase | APR48_20355 | Not Available | Negative | 4333461 - 4334768 | 49519.1 |
| tetr family transcriptional regulator | APR48_20365 | Not Available | Negative | 4336291 - 4336947 | 24006.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
