Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_01225 | Not Available | Positive | 259277 - 260335 | 36675.7 |
| hypothetical protein | APR48_01230 | Not Available | Positive | 260378 - 261298 | 33727.5 |
| hypothetical protein | APR48_01235 | Not Available | Negative | 261342 - 261881 | 19989.7 |
| hypothetical protein | APR48_01240 | Not Available | Negative | 261874 - 262887 | 35160.4 |
| hypothetical protein | APR48_01245 | Not Available | Negative | 262899 - 263681 | 27986.6 |
| acetolactate synthase catalytic subunit | APR48_01250 | Not Available | Negative | 263693 - 265411 | 61043.4 |
| hypothetical protein | APR48_01255 | Not Available | Negative | 265421 - 266281 | 30360.7 |
| crotonase | APR48_01260 | Not Available | Negative | 266595 - 267401 | 29651.5 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | APR48_01265 | Not Available | Negative | 267479 - 268069 | 21444.3 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | APR48_01270 | Not Available | Negative | 268066 - 269535 | 53915.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
