Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_20255 | Not Available | Positive | 4312745 - 4313005 | 9502.19 |
| twitching motility protein pilt | APR48_20260 | Not Available | Positive | 4313005 - 4313424 | 15579.7 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | APR48_20265 | Not Available | Negative | 4313446 - 4314495 | 37659.8 |
| mfs transporter | APR48_20270 | Not Available | Negative | 4314553 - 4315758 | 40773.6 |
| histidinol-phosphate aminotransferase | APR48_20275 | Not Available | Negative | 4315755 - 4316894 | 40691.3 |
| fad-linked oxidase | APR48_20280 | Not Available | Negative | 4316891 - 4318279 | 48889.0 |
| n-formylglutamate deformylase | APR48_20285 | Not Available | Negative | 4318287 - 4319102 | 29300.8 |
| n-formimino-l-glutamate deiminase | APR48_20290 | Not Available | Negative | 4319116 - 4320498 | 49317.4 |
| imidazolonepropionase | APR48_20295 | Not Available | Negative | 4320495 - 4321730 | 43011.7 |
| hutd | APR48_20300 | Not Available | Negative | 4321756 - 4322337 | 20325.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
