Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine biosynthesis protein apbe | APR48_20200 | Not Available | Negative | 4299428 - 4300321 | 31801.9 |
| 6-hydroxynicotinate reductase | APR48_20205 | Not Available | Negative | 4300324 - 4301952 | 57362.8 |
| ferredoxin-nadp reductase | APR48_20210 | Not Available | Positive | 4302257 - 4303030 | 29027.9 |
| tetr family transcriptional regulator | APR48_20215 | Not Available | Positive | 4303050 - 4303820 | 28826.0 |
| enamidase | APR48_20220 | Not Available | Positive | 4303766 - 4304965 | 41516.5 |
| polysaccharide synthesis protein gtra | APR48_20225 | Not Available | Negative | 4304979 - 4305380 | 14093.3 |
| glycosyl transferase | APR48_20230 | Not Available | Negative | 4305382 - 4306356 | 35472.6 |
| hypothetical protein | APR48_20235 | Not Available | Negative | 4306392 - 4308179 | 65575.8 |
| hypothetical protein | APR48_20245 | Not Available | Negative | 4311220 - 4311657 | 15621.5 |
| lysr family transcriptional regulator | APR48_20250 | Not Available | Positive | 4311774 - 4312691 | 32766.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
