Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | APR48_20150 | Not Available | Negative | 4287017 - 4290760 | 132753.0 |
| ferredoxin | APR48_20155 | Not Available | Negative | 4290757 - 4291263 | 17545.2 |
| abc transporter substrate-binding protein | APR48_20160 | Not Available | Negative | 4291241 - 4292374 | 40009.2 |
| nicotinamidase | APR48_20165 | Not Available | Negative | 4292467 - 4293192 | 25596.5 |
| abc transporter atp-binding protein | APR48_20170 | Not Available | Negative | 4293278 - 4294021 | 27269.2 |
| abc transporter atp-binding protein | APR48_20175 | Not Available | Negative | 4294018 - 4294782 | 27787.0 |
| abc transporter permease | APR48_20180 | Not Available | Negative | 4294779 - 4296707 | 68387.4 |
| abc transporter substrate-binding protein | APR48_20185 | Not Available | Negative | 4296850 - 4298055 | 43778.4 |
| peptide synthetase | APR48_20190 | Not Available | Negative | 4298131 - 4298715 | 20100.4 |
| hypothetical protein | APR48_20195 | Not Available | Negative | 4298762 - 4299406 | 22947.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
