Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| clpv1 family t6ss atpase | APR48_20100 | Not Available | Negative | 4274642 - 4276913 | 81911.6 |
| hypothetical protein | APR48_20105 | Not Available | Negative | 4276910 - 4278091 | 43819.9 |
| type vi secretion system protein impg | APR48_20110 | Not Available | Negative | 4278088 - 4279968 | 69836.2 |
| hypothetical protein | APR48_20115 | Not Available | Negative | 4279968 - 4280525 | 20648.7 |
| virulence protein scie type | APR48_20120 | Not Available | Negative | 4280525 - 4281391 | 30748.3 |
| hypothetical protein | APR48_20125 | Not Available | Negative | 4281654 - 4282136 | 17200.2 |
| evpb family type vi secretion protein | APR48_20130 | Not Available | Negative | 4282182 - 4283687 | 56572.5 |
| hypothetical protein | APR48_20135 | Not Available | Negative | 4283721 - 4284290 | 20591.4 |
| type vi secretion protein impa | APR48_20140 | Not Available | Negative | 4284352 - 4285443 | 39608.3 |
| fumarylacetoacetate hydrolase | APR48_20145 | Not Available | Negative | 4285624 - 4286814 | 41541.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
