Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR48_20050 | Not Available | Negative | 4264785 - 4265633 | 30785.3 |
| alkanesulfonate monooxygenase | APR48_20055 | Not Available | Negative | 4265644 - 4266813 | 42263.4 |
| abc transporter substrate-binding protein | APR48_20060 | Not Available | Negative | 4266813 - 4267769 | 33712.9 |
| abc transporter substrate-binding protein | APR48_20065 | Not Available | Negative | 4267808 - 4268782 | 34777.1 |
| nadph-dependent fmn reductase | APR48_20070 | Not Available | Negative | 4268975 - 4269559 | 20785.3 |
| sulfate transporter subunit | APR48_20075 | Not Available | Negative | 4269666 - 4270709 | 37703.9 |
| iron transporter | APR48_20080 | Not Available | Positive | 4270853 - 4271125 | 10253.3 |
| fad-dependent cmnm(5)s(2)u34 oxidoreductase | APR48_20085 | Not Available | Positive | 4271145 - 4273007 | 66365.9 |
| antibiotic biosynthesis monooxygenase | APR48_20090 | Not Available | Negative | 4273014 - 4273343 | 12202.3 |
| transglutaminase | APR48_20095 | Not Available | Positive | 4273445 - 4274347 | 33227.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
