Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription factor | APR48_20000 | Not Available | Negative | 4257780 - 4258049 | 9954.0 |
| serine acetyltransferase | APR48_20005 | Not Available | Negative | 4258057 - 4258968 | 32893.3 |
| rhodanese | APR48_20010 | Not Available | Negative | 4259001 - 4259480 | 17109.3 |
| hypothetical protein | APR48_20015 | Not Available | Positive | 4259699 - 4260286 | 21223.4 |
| hypothetical protein | APR48_20020 | Not Available | Positive | 4260313 - 4260660 | 11599.7 |
| transporter | APR48_20025 | Not Available | Negative | 4260727 - 4260942 | 7741.44 |
| malonic semialdehyde reductase | APR48_20030 | Not Available | Negative | 4261003 - 4261599 | 21642.6 |
| o-acetylhomoserine aminocarboxypropyltransferase | APR48_20035 | Not Available | Negative | 4261620 - 4262909 | 46055.6 |
| sulfonate abc transporter atp-binding protein | APR48_20040 | Not Available | Negative | 4262941 - 4263786 | 31041.5 |
| sulfonate abc transporter substrate-binding protein | APR48_20045 | Not Available | Negative | 4263788 - 4264774 | 34889.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
