Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_19945 | Not Available | Positive | 4245589 - 4246326 | 26339.6 |
| hypothetical protein | APR48_19950 | Not Available | Positive | 4246349 - 4247323 | 34954.2 |
| nadph-dependent fmn reductase | APR48_19955 | Not Available | Negative | 4247346 - 4247903 | 20085.0 |
| abc transporter substrate-binding protein | APR48_19960 | Not Available | Positive | 4248109 - 4249074 | 34249.3 |
| methyltryptophan oxidase | APR48_19965 | Not Available | Positive | 4249088 - 4250302 | 43660.8 |
| 2-dehydropantoate 2-reductase | APR48_19970 | Not Available | Positive | 4250368 - 4251306 | 32509.1 |
| hydroxylase | APR48_19975 | Not Available | Negative | 4251462 - 4252820 | 51115.9 |
| arac family transcriptional regulator | APR48_19980 | Not Available | Positive | 4252928 - 4253806 | 32167.2 |
| dienelactone hydrolase | APR48_19985 | Not Available | Positive | 4253803 - 4254798 | 34816.8 |
| hypothetical protein | APR48_19995 | Not Available | Negative | 4256714 - 4257646 | 34415.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
