Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide adenylyltransferase | APR48_19845 | Not Available | Negative | 4225291 - 4225917 | 22647.2 |
| hypothetical protein | APR48_19850 | Not Available | Negative | 4225914 - 4226840 | 34226.7 |
| phosphoribosylamine--glycine ligase | APR48_19855 | Not Available | Negative | 4226840 - 4228141 | 46510.7 |
| hypothetical protein | APR48_19860 | Not Available | Negative | 4228199 - 4228924 | 26049.7 |
| hypothetical protein | APR48_19865 | Not Available | Positive | 4229169 - 4230209 | 37401.1 |
| acyltransferase | APR48_19870 | Not Available | Positive | 4230243 - 4231043 | 29444.6 |
| glycosyl transferase family 2 | APR48_19875 | Not Available | Positive | 4231010 - 4231786 | 28866.0 |
| rnd transporter | APR48_19880 | Not Available | Negative | 4231791 - 4233176 | 48884.2 |
| macrolide transporter | APR48_19885 | Not Available | Negative | 4233169 - 4235154 | 71450.7 |
| hemolysin secretion protein d | APR48_19890 | Not Available | Negative | 4235151 - 4236317 | 42152.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
