Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monooxygenase | APR48_19795 | Not Available | Positive | 4214382 - 4216088 | 62440.5 |
| lipid transporter atp-binding/permease | APR48_19800 | Not Available | Positive | 4216117 - 4217875 | 63777.2 |
| gntr family transcriptional regulator | APR48_19805 | Not Available | Negative | 4217857 - 4218504 | 22781.7 |
| 3-ketoacyl-acp reductase | APR48_19810 | Not Available | Positive | 4218702 - 4219484 | 26952.3 |
| 3-keto-5-aminohexanoate cleavage protein | APR48_19815 | Not Available | Positive | 4219528 - 4220460 | 34042.0 |
| hypothetical protein | APR48_19820 | Not Available | Positive | 4220552 - 4221886 | 46975.4 |
| ribonuclease | APR48_19825 | Not Available | Negative | 4221899 - 4223425 | 56296.9 |
| septum formation inhibitor maf | APR48_19830 | Not Available | Negative | 4223442 - 4224053 | 21702.4 |
| 50s rrna methyltransferase | APR48_19835 | Not Available | Negative | 4224126 - 4224593 | 17295.9 |
| iojap family protein | APR48_19840 | Not Available | Negative | 4224590 - 4225291 | 24657.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
