Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | APR48_01175 | Not Available | Positive | 249598 - 250185 | 22209.7 |
| lysr family transcriptional regulator | APR48_01180 | Not Available | Negative | 250213 - 251127 | 34293.4 |
| twin-arginine translocation pathway signal protein | APR48_01185 | Not Available | Positive | 251347 - 252348 | 35503.8 |
| abc transporter permease | APR48_01190 | Not Available | Positive | 252525 - 253220 | 25713.2 |
| abc transporter | APR48_01195 | Not Available | Positive | 253222 - 254028 | 29283.0 |
| enoyl-coa hydratase | APR48_01200 | Not Available | Positive | 254049 - 254843 | 28987.9 |
| thiolase | APR48_01205 | Not Available | Positive | 254847 - 256013 | 41782.9 |
| dna-binding protein | APR48_01210 | Not Available | Positive | 256019 - 256447 | 15482.8 |
| amp-dependent synthetase | APR48_01215 | Not Available | Positive | 256455 - 258005 | 55943.6 |
| hypothetical protein | APR48_01220 | Not Available | Positive | 258297 - 259280 | 35380.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
