Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulose phosphate epimerase | APR48_19745 | Not Available | Negative | 4204849 - 4205538 | 24375.2 |
| twitching motility protein pilt | APR48_19750 | Not Available | Negative | 4205535 - 4206014 | 17506.2 |
| prevent-host-death protein | APR48_19755 | Not Available | Negative | 4206019 - 4206294 | 10046.0 |
| co2+/mg2+ efflux protein apag | APR48_19760 | Not Available | Positive | 4206394 - 4206789 | 14044.7 |
| recombinase | APR48_19765 | Not Available | Positive | 4206868 - 4208844 | 71500.0 |
| sodium:proton exchanger | APR48_19770 | Not Available | Positive | 4208841 - 4210115 | 44396.6 |
| gamma-glutamyl ligase | APR48_19775 | Not Available | Positive | 4210184 - 4211332 | 43389.7 |
| thiamine monophosphate kinase | APR48_19780 | Not Available | Positive | 4211371 - 4212345 | 33427.9 |
| lysr family transcriptional regulator | APR48_19785 | Not Available | Negative | 4212359 - 4213255 | 32586.7 |
| abc transporter substrate-binding protein | APR48_19790 | Not Available | Positive | 4213357 - 4214370 | 34296.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
