Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mandelate racemase | APR48_19685 | Not Available | Negative | 4191677 - 4192771 | 38873.4 |
| abc transporter atp-binding protein | APR48_19690 | Not Available | Negative | 4192786 - 4193496 | 24775.6 |
| abc transporter atp-binding protein | APR48_19695 | Not Available | Negative | 4193493 - 4194254 | 27087.9 |
| branched-chain amino acid abc transporter permease | APR48_19700 | Not Available | Negative | 4194258 - 4195202 | 32525.3 |
| abc transporter permease | APR48_19705 | Not Available | Negative | 4195199 - 4196071 | 29310.0 |
| abc transporter substrate-binding protein | APR48_19715 | Not Available | Negative | 4197292 - 4198464 | 41671.5 |
| indolepyruvate oxidoreductase subunit b | APR48_19720 | Not Available | Negative | 4198511 - 4200073 | 56170.8 |
| indolepyruvate ferredoxin oxidoreductase | APR48_19725 | Not Available | Negative | 4200070 - 4202232 | 76723.3 |
| succinylglutamate desuccinylase | APR48_19735 | Not Available | Negative | 4203402 - 4204388 | 35313.0 |
| hypothetical protein | APR48_19740 | Not Available | Positive | 4204566 - 4204829 | 9574.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
