Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | APR48_19635 | Not Available | Negative | 4179689 - 4180726 | 36908.7 |
| hypothetical protein | APR48_19640 | Not Available | Negative | 4180844 - 4181686 | 30082.6 |
| hypothetical protein | APR48_19645 | Not Available | Negative | 4181940 - 4183142 | 43719.2 |
| hypothetical protein | APR48_19650 | Not Available | Negative | 4183149 - 4184252 | 40287.6 |
| amidohydrolase | APR48_19655 | Not Available | Negative | 4184287 - 4185165 | 32565.1 |
| hypothetical protein | APR48_19660 | Not Available | Negative | 4185197 - 4185991 | 27734.8 |
| hypothetical protein | APR48_19665 | Not Available | Positive | 4186122 - 4187012 | 32639.8 |
| hydroperoxidase | APR48_19670 | Not Available | Negative | 4187019 - 4189223 | 80789.7 |
| transglutaminase | APR48_19675 | Not Available | Positive | 4189702 - 4190529 | 30318.3 |
| hypothetical protein | APR48_19680 | Not Available | Positive | 4190777 - 4191673 | 33421.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
