Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate abc transporter substrate-binding protein | APR48_19580 | Not Available | Negative | 4159029 - 4160048 | 37263.8 |
| histidine kinase | APR48_19590 | Not Available | Positive | 4161368 - 4163257 | 68272.7 |
| abc transporter substrate-binding protein | APR48_19595 | Not Available | Positive | 4163505 - 4164506 | 34061.0 |
| histidine kinase | APR48_19600 | Not Available | Positive | 4164503 - 4166467 | 68923.2 |
| hypothetical protein | APR48_19605 | Not Available | Positive | 4166490 - 4167287 | 29509.9 |
| hypothetical protein | APR48_19610 | Not Available | Negative | 4167245 - 4168933 | 63353.4 |
| hypothetical protein | APR48_19615 | Not Available | Positive | 4169011 - 4169865 | 30488.7 |
| hypothetical protein | APR48_19620 | Not Available | Negative | 4169862 - 4175441 | 181799.0 |
| peptide abc transporter permease | APR48_19625 | Not Available | Negative | 4175444 - 4177159 | 61740.1 |
| hypothetical protein | APR48_19630 | Not Available | Negative | 4177418 - 4179559 | 77139.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
