Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_19520 | Not Available | Negative | 4143045 - 4144532 | 52986.1 |
| hypothetical protein | APR48_19525 | Not Available | Negative | 4144636 - 4145685 | 37902.7 |
| malate dehydrogenase | APR48_19530 | Not Available | Positive | 4145865 - 4148213 | 84994.1 |
| guanine-specific ribonuclease n1 and t1 | APR48_19535 | Not Available | Positive | 4148416 - 4148832 | 14980.6 |
| barnase inhibitor | APR48_19540 | Not Available | Positive | 4148892 - 4149311 | 15801.8 |
| 16s rrna methyltransferase | APR48_19545 | Not Available | Negative | 4149630 - 4150397 | 28396.6 |
| molecular chaperone sura | APR48_19550 | Not Available | Negative | 4150408 - 4151817 | 50984.4 |
| lps biosynthesis protein | APR48_19555 | Not Available | Negative | 4151839 - 4154451 | 96907.6 |
| aminoglycoside phosphotransferase | APR48_19560 | Not Available | Positive | 4154687 - 4155805 | 41672.0 |
| 16s rrna methyltransferase | APR48_19565 | Not Available | Positive | 4155893 - 4156627 | 25272.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
