Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | APR48_19470 | Not Available | Positive | 4125772 - 4126839 | 38839.5 |
| hypothetical protein | APR48_19475 | Not Available | Negative | 4126847 - 4127215 | 12550.5 |
| hypothetical protein | APR48_19480 | Not Available | Negative | 4127212 - 4128885 | 60082.1 |
| iron transporter | APR48_19485 | Not Available | Negative | 4128882 - 4129187 | 9990.55 |
| glycerophosphodiester phosphodiesterase | APR48_19490 | Not Available | Negative | 4129350 - 4130705 | 48487.6 |
| penicillin-binding protein 1c | APR48_19495 | Not Available | Negative | 4130779 - 4133112 | 84259.4 |
| alpha-2-macroglobulin | APR48_19500 | Not Available | Negative | 4133132 - 4139155 | 218639.0 |
| fumarate reductase | APR48_19505 | Not Available | Negative | 4139390 - 4141021 | 58651.5 |
| spermidine synthase | APR48_19510 | Not Available | Negative | 4141207 - 4142754 | 56448.2 |
| hypothetical protein | APR48_19515 | Not Available | Negative | 4142769 - 4142987 | 7785.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
