Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| divalent metal cation transporter mnth | APR48_19420 | Not Available | Negative | 4115658 - 4116986 | 47045.7 |
| antibiotic biosynthesis monooxygenase | APR48_19425 | Not Available | Positive | 4117117 - 4117425 | 10780.2 |
| hypothetical protein | APR48_19430 | Not Available | Positive | 4117547 - 4118146 | 21563.2 |
| hypothetical protein | APR48_19435 | Not Available | Positive | 4118329 - 4118772 | 15901.7 |
| glyceraldehyde-3-phosphate dehydrogenase | APR48_19440 | Not Available | Negative | 4118839 - 4119840 | 36195.5 |
| transketolase | APR48_19445 | Not Available | Negative | 4119902 - 4122004 | 75194.5 |
| s-adenosylmethionine decarboxylase proenzyme | APR48_19450 | Not Available | Positive | 4122177 - 4122563 | 13496.2 |
| nucleotidyltransferase | APR48_19455 | Not Available | Positive | 4122593 - 4123306 | 24806.9 |
| xaa-pro aminopeptidase | APR48_19460 | Not Available | Positive | 4123337 - 4124734 | 51620.2 |
| lysr family transcriptional regulator | APR48_19465 | Not Available | Negative | 4124676 - 4125641 | 35072.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
