Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | APR48_19370 | Not Available | Negative | 4106598 - 4107800 | 43008.2 |
| pirin | APR48_19375 | Not Available | Negative | 4107871 - 4108734 | 30476.1 |
| fmn reductase | APR48_19380 | Not Available | Negative | 4108731 - 4109315 | 21500.9 |
| lysr family transcriptional regulator | APR48_19385 | Not Available | Positive | 4109457 - 4110383 | 33008.6 |
| peptidylprolyl isomerase | APR48_19390 | Not Available | Positive | 4110421 - 4110897 | 17445.9 |
| hypothetical protein | APR48_19395 | Not Available | Positive | 4110920 - 4111765 | 31210.8 |
| metal-chelation protein chad | APR48_19400 | Not Available | Negative | 4111802 - 4113394 | 57882.8 |
| extradiol dioxygenase | APR48_19405 | Not Available | Positive | 4113618 - 4114034 | 15182.2 |
| pirin | APR48_19410 | Not Available | Positive | 4114184 - 4115254 | 38472.5 |
| hypothetical protein | APR48_19415 | Not Available | Negative | 4115259 - 4115549 | 10673.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
