Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pseudo | Not Available | Not Available | Positive | 4096051 - 4096126 | Not Available |
| pyridine nucleotide-disulfide oxidoreductase | APR48_19320 | Not Available | Negative | 4096902 - 4098194 | 44156.4 |
| (2fe-2s)-binding protein | APR48_19325 | Not Available | Negative | 4098191 - 4098454 | 9095.23 |
| d-amino acid oxidase | APR48_19330 | Not Available | Negative | 4098451 - 4099560 | 38613.6 |
| hydroxyproline-2-epimerase | APR48_19335 | Not Available | Negative | 4099569 - 4100513 | 32988.9 |
| abc transporter substrate-binding protein | APR48_19340 | Not Available | Negative | 4100605 - 4101738 | 39761.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | APR48_19345 | Not Available | Negative | 4101821 - 4102735 | 33385.5 |
| hypothetical protein | APR48_19350 | Not Available | Negative | 4102876 - 4103565 | 22531.0 |
| toxin hipa | APR48_19355 | Not Available | Negative | 4103703 - 4105016 | 48739.2 |
| receptor | APR48_19365 | Not Available | Negative | 4105582 - 4106544 | 32932.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
