Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | APR48_01125 | Not Available | Positive | 240988 - 242124 | 41029.1 |
| phob family transcriptional regulator | APR48_01130 | Not Available | Positive | 242169 - 242876 | 25883.3 |
| hypothetical protein | APR48_01135 | Not Available | Positive | 242873 - 244240 | 48769.8 |
| hypothetical protein | APR48_01140 | Not Available | Positive | 244381 - 244869 | 16988.3 |
| hypothetical protein | APR48_01145 | Not Available | Positive | 244910 - 246421 | 52896.3 |
| hypothetical protein | APR48_01150 | Not Available | Positive | 246623 - 246850 | 8473.23 |
| hypothetical protein | APR48_01155 | Not Available | Negative | 246993 - 247211 | 7921.47 |
| toxin-antitoxin system protein | APR48_01160 | Not Available | Positive | 247482 - 247757 | 10165.3 |
| gcn5 family acetyltransferase | APR48_01165 | Not Available | Positive | 247754 - 248248 | 17680.4 |
| branched-chain amino acid abc transporter substrate-binding protein | APR48_01170 | Not Available | Negative | 248276 - 249397 | 38731.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
