Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general stress protein | APR48_19210 | Not Available | Positive | 4066082 - 4066582 | 18347.6 |
| hypothetical protein | APR48_19215 | Not Available | Positive | 4066678 - 4068840 | 76914.2 |
| hypothetical protein | APR48_19220 | Not Available | Positive | 4068873 - 4069481 | 22233.6 |
| permease | APR48_19225 | Not Available | Positive | 4069535 - 4070296 | 25404.8 |
| luxr family transcriptional regulator | APR48_19230 | Not Available | Negative | 4070307 - 4070939 | 23026.8 |
| hypothetical protein | APR48_19235 | Not Available | Positive | 4071491 - 4071847 | 12575.3 |
| glycogen branching protein | APR48_19240 | Not Available | Positive | 4072116 - 4074023 | 71679.0 |
| alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase | APR48_19245 | Not Available | Positive | 4074137 - 4076206 | 77582.3 |
| alpha-amylase | APR48_19250 | Not Available | Positive | 4076218 - 4079565 | 126531.0 |
| glycogen debranching protein | APR48_19260 | Not Available | Positive | 4080515 - 4082659 | 80413.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
