Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipase | APR48_19160 | Not Available | Positive | 4056001 - 4057158 | 42682.3 |
| nad synthetase | APR48_19165 | Not Available | Positive | 4057187 - 4058032 | 29911.0 |
| arac family transcriptional regulator | APR48_19170 | Not Available | Negative | 4058034 - 4058918 | 33555.1 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | APR48_19175 | Not Available | Positive | 4059076 - 4059867 | 28135.7 |
| phosphatidylethanolamine-binding protein | APR48_19180 | Not Available | Positive | 4059872 - 4060417 | 18302.1 |
| laci family transcriptional regulator | APR48_19185 | Not Available | Negative | 4060433 - 4061470 | 36959.3 |
| permease dsdx | APR48_19190 | Not Available | Positive | 4061657 - 4063009 | 47599.4 |
| gluconokinase | APR48_19195 | Not Available | Positive | 4063023 - 4064582 | 55965.2 |
| arac family transcriptional regulator | APR48_19200 | Not Available | Positive | 4064699 - 4065631 | 33984.6 |
| hypothetical protein | APR48_19205 | Not Available | Positive | 4065693 - 4065896 | 7285.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
