Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyltranspeptidase | APR48_19005 | Not Available | Positive | 4020325 - 4022052 | 60276.8 |
| fumarylacetoacetase | APR48_19010 | Not Available | Negative | 4022134 - 4023402 | 45153.6 |
| abc transporter substrate-binding protein | APR48_19015 | Not Available | Negative | 4023431 - 4024405 | 33429.6 |
| homogentisate 1,2-dioxygenase | APR48_19020 | Not Available | Negative | 4024402 - 4025715 | 48261.1 |
| hypothetical protein | APR48_19025 | Not Available | Negative | 4025737 - 4025934 | 6983.26 |
| fad-dependent oxidoreductase | APR48_19030 | Not Available | Negative | 4025959 - 4027635 | 61114.1 |
| mbl fold metallo-hydrolase | APR48_19035 | Not Available | Negative | 4027695 - 4028654 | 35191.7 |
| iclr family transcriptional regulator | APR48_19040 | Not Available | Positive | 4028774 - 4029607 | 29534.5 |
| hypothetical protein | APR48_19045 | Not Available | Positive | 4029604 - 4031142 | 54547.2 |
| hypothetical protein | APR48_19050 | Not Available | Positive | 4031145 - 4032158 | 37157.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
