Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-aminobenzoate-coa ligase | APR48_18900 | Not Available | Negative | 3994299 - 3995951 | 59021.0 |
| acyl-coa dehydrogenase | APR48_18905 | Not Available | Negative | 3995948 - 3997138 | 42138.6 |
| enoyl-coa hydratase | APR48_18910 | Not Available | Negative | 3997143 - 3997997 | 30558.8 |
| marr family transcriptional regulator | APR48_18915 | Not Available | Negative | 3997994 - 3998473 | 18206.0 |
| salicylyl-coa 5-hydroxylase | APR48_18920 | Not Available | Negative | 3998490 - 4000865 | 87329.4 |
| cyclopropane-fatty-acyl-phospholipid synthase | APR48_18925 | Not Available | Positive | 4001026 - 4002297 | 46863.0 |
| hypothetical protein | APR48_18930 | Not Available | Positive | 4002311 - 4002634 | 12017.1 |
| mfs transporter | APR48_18935 | Not Available | Negative | 4002726 - 4003745 | 35273.7 |
| lysr family transcriptional regulator | APR48_18940 | Not Available | Negative | 4003868 - 4004806 | 33952.1 |
| oxidoreductase | APR48_18945 | Not Available | Positive | 4004920 - 4005687 | 25868.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
