Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l30 | APR48_18850 | Not Available | Positive | 3988339 - 3988524 | 6805.47 |
| 50s ribosomal protein l15 | APR48_18855 | Not Available | Positive | 3988536 - 3988967 | 14577.0 |
| preprotein translocase subunit secy | APR48_18860 | Not Available | Positive | 3989000 - 3990313 | 47585.4 |
| 30s ribosomal protein s13 | APR48_18865 | Not Available | Positive | 3990502 - 3990867 | 13801.0 |
| 30s ribosomal protein s11 | APR48_18870 | Not Available | Positive | 3990881 - 3991285 | 14142.9 |
| 30s ribosomal protein s4 | APR48_18875 | Not Available | Positive | 3991416 - 3992039 | 23524.2 |
| dna-directed rna polymerase subunit alpha | APR48_18880 | Not Available | Positive | 3992185 - 3993174 | 36158.6 |
| 50s ribosomal protein l17 | APR48_18885 | Not Available | Positive | 3993262 - 3993663 | 14957.5 |
| Trna-met | Not Available | Not Available | Positive | 3993685 - 3993761 | Not Available |
| enamine deaminase rida | APR48_18895 | Not Available | Negative | 3993907 - 3994305 | 14595.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
