Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroline-5-carboxylate reductase | APR48_18800 | Not Available | Negative | 3982569 - 3983426 | 29413.2 |
| hypothetical protein | APR48_18805 | Not Available | Negative | 3983423 - 3984607 | 41866.8 |
| 50s ribosomal protein l14 | APR48_18810 | Not Available | Positive | 3984833 - 3985201 | 13153.3 |
| 50s ribosomal protein l24 | APR48_18815 | Not Available | Positive | 3985215 - 3985547 | 11822.5 |
| 50s ribosomal protein l5 | APR48_18820 | Not Available | Positive | 3985559 - 3986098 | 20066.6 |
| 30s ribosomal protein s14 | APR48_18825 | Not Available | Positive | 3986107 - 3986412 | 11380.9 |
| 30s ribosomal protein s8 | APR48_18830 | Not Available | Positive | 3986433 - 3986828 | 14064.2 |
| 50s ribosomal protein l6 | APR48_18835 | Not Available | Positive | 3986853 - 3987386 | 18892.0 |
| 50s ribosomal protein l18 | APR48_18840 | Not Available | Positive | 3987401 - 3987766 | 12665.3 |
| 30s ribosomal protein s5 | APR48_18845 | Not Available | Positive | 3987785 - 3988303 | 18132.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
