Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APR48_18745 | Not Available | Negative | 3973329 - 3974303 | 34180.3 |
| amidohydrolase | APR48_18750 | Not Available | Negative | 3974357 - 3975256 | 32460.8 |
| transcriptional regulator | APR48_18760 | Not Available | Positive | 3976055 - 3976972 | 32633.9 |
| arac family transcriptional regulator | APR48_18765 | Not Available | Negative | 3976982 - 3977926 | 34514.5 |
| arac family transcriptional regulator | APR48_18770 | Not Available | Positive | 3978117 - 3978920 | 28233.8 |
| tautomerase | APR48_18775 | Not Available | Positive | 3978951 - 3979346 | 14919.0 |
| lysr family transcriptional regulator | APR48_18780 | Not Available | Positive | 3979421 - 3980386 | 35634.4 |
| dna starvation/stationary phase protection protein | APR48_18785 | Not Available | Positive | 3980544 - 3981125 | 21155.2 |
| 4-hydroxybenzoate octaprenyltransferase | APR48_18790 | Not Available | Positive | 3981122 - 3982021 | 32879.2 |
| dehydratase | APR48_18795 | Not Available | Positive | 3982047 - 3982562 | 18981.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
