Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate abc transporter substrate-binding protein | APR48_18695 | Not Available | Positive | 3960870 - 3961805 | 32727.4 |
| phosphonate abc transporter | APR48_18700 | Not Available | Positive | 3961880 - 3962674 | 28062.1 |
| phosphonate abc transporter permease | APR48_18705 | Not Available | Positive | 3962671 - 3963702 | 37710.4 |
| hypothetical protein | APR48_18710 | Not Available | Positive | 3963850 - 3964050 | 6103.31 |
| phospholipase c, phosphocholine-specific | APR48_18715 | Not Available | Positive | 3964103 - 3966358 | 81803.0 |
| hypothetical protein | APR48_18720 | Not Available | Positive | 3966390 - 3968429 | 65185.0 |
| hypothetical protein | APR48_18725 | Not Available | Positive | 3968507 - 3968956 | 16855.7 |
| beta-glucosidase | APR48_18730 | Not Available | Negative | 3968970 - 3971246 | 80511.6 |
| laci family transcriptional regulator | APR48_18735 | Not Available | Negative | 3971344 - 3972318 | 33936.2 |
| hydroxyacid dehydrogenase | APR48_18740 | Not Available | Negative | 3972355 - 3973332 | 34089.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
